Model Configuration - planktonsdm 0.0.7 documentation

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# Model Configuration

Note

most of the model is defined within a YAML file (myconfig.yml)

## myconfig.yml

### root

`root: /home/phyto/CoccoML/`

where to save root files

### path_out

`path_out: ModelOutput/`

where to save the model output (`root + path_out`)

### traits

`traits: /home/phyto/CoccoML/data/traits.csv`

### scale_X

`scale_X: True`

### verbose

`verbose: 1`

### seed

`seed : 1`

### n_threads

`n_threads : 2` how many cpu threads to use

### cv

`cv : 3`

### predict_probability

`predict_probability: False`

### ensemble_config

> regressor: False

> classifier: True

> m1: “rf”

> m2: “xgb”

> m3: “knn”